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Intron Name: Anas_platyrhynchos_platyrhynchos_3_43200629_43201328_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43200629 - 43201328

Intron Length:

700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

ATTCCTCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

AAATCATGAATA

Flanking Amino Acid:

PFSILQGKAKVLVLLRNPKD

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

86.9

30.1

Major BPS

71.6

0.54

33.1

Major PPT

79.7

0.67

0.8

70.6

35.6

Minor 5ss

34.7

-1.7

3.1

49.5

46.7

Minor BPS

52.9

0.09

1.7

62.73

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031339

43155415 - 43203899

48485

ENSAPLT00000018716

43197906 - 43203899

5994

ENSAPLT00000016659

43197906 - 43203899

5994

ENSAPLT00000048345

43158136 - 43203899

45764