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Intron Name: Anas_platyrhynchos_platyrhynchos_3_43207548_43208084_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43207548 - 43208084

Intron Length:

537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGTTA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TTGAATGTCATG

Flanking Amino Acid:

MTITYEELKENRALGVKNIA

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.8

80.9

28.8

Major BPS

74.6

0.61

1.4

34.5

Major PPT

89.5

0.89

0.6

Minor 5ss

34.9

-1.7

3.4

46.2

49.1

Minor BPS

37.1

-1.1

2.3

44.08

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016674

43206276 - 43212276

6001