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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4331419_4333308_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4331419 - 4333308

Intron Length:

1890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCGCA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTCAA

U12 Branch Point Sequence:

GTCCGCTCAAAG

Flanking Amino Acid:

PEFGLSYYIVRFKGSKKDDV

Intron Amino Acid Position:

573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

67.9

37.4

Major BPS

58.2

0.2

1.1

37.5

Major PPT

100

1.12

0.4

100

Minor 5ss

36.7

-1.5

3.3

48.4

47.2

Minor BPS

43.4

-0.6

2.1

47.38

Associated Gene:

Gene:

FERMT1

Ensembl Gene ID:

ENSAPLG00000001367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001656

4316204 - 4334303

18100