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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4340281_4340757_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4340281 - 4340757

Intron Length:

477

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCA|GCACGCCCC

5'SS Class:

weak_major

3'SS Sequence:

CCGGCGAGCAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGTGAG

U12 Branch Point Sequence:

TGGTGAGGAGCA

Flanking Amino Acid:

PYQLVFAQQSTEPAASRDVT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.3

0.1

1.4

53.7

41.9

Major BPS

46.9

-0.1

1.7

42.8

49.4

Major PPT

41.3

-0.5

1.6

33.7

34.5

Minor 5ss

29.9

-2.3

4.2

48.2

41.7

Minor BPS

33.5

-1.2

2.4

46.12

42.9

Associated Gene:

Gene:

LRRN4

Ensembl Gene ID:

ENSAPLG00000003229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003285

4340211 - 4353513

13303