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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4341387_4342097_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4341387 - 4342097

Intron Length:

711

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCA|GCAAATCCC

5'SS Class:

weak_major

3'SS Sequence:

AGTTCAACCAGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TTCAGTTCAACC

Flanking Amino Acid:

SGTFLEKSKSWTKDLPSLRE

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.2

0.17

1.4

63.3

39.4

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

46.9

-0.1

1.7

48.1

38.9

Minor 5ss

26.7

-2.7

3.9

42.1

38.4

Minor BPS

48.6

-0.1

62.9

42.9

Associated Gene:

Gene:

LRRN4

Ensembl Gene ID:

ENSAPLG00000003229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003285

4340211 - 4353513

13303