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Intron Name: Anas_platyrhynchos_platyrhynchos_3_43415713_43416220_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

43415713 - 43416220

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAGGG

5'SS Class:

major

3'SS Sequence:

ACCTTCCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

TGACGTTTCACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.68

44.1

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

66.8

0.38

62.2

34.1

Minor 5ss

28.8

-2.4

3.4

38.5

46.5

Minor BPS

45.7

-0.3

2.1

57.17

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016877

43415244 - 43446174

30931