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Intron Name: Anas_platyrhynchos_platyrhynchos_3_43416383_43421470_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43416383 - 43421470

Intron Length:

5088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTATTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTTAT

U12 Branch Point Sequence:

CCGTCTGTAACG

Flanking Amino Acid:

DREQLSLTVGVKATGQELFQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

66.6

39.6

Major BPS

66.2

0.4

1.3

57.4

49.1

Major PPT

90.5

0.91

0.7

89.1

27.5

Minor 5ss

27.1

-2.6

26.2

36.9

Minor BPS

49.1

-0.2

2.1

54.01

47.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016877

43415244 - 43446174

30931