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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4343334_4344348_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4343334 - 4344348

Intron Length:

1015

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

GTCCCCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TCTCACTGAATT

Flanking Amino Acid:

LSKPEKVVLQRALDTFCNVS

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

75.9

0.58

0.8

69.2

31.4

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

58.4

0.34

1.7

75.59

40.9

Associated Gene:

Gene:

LRRN4

Ensembl Gene ID:

ENSAPLG00000003229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003285

4340211 - 4353513

13303