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Intron Name: Anas_platyrhynchos_platyrhynchos_3_43442069_43442205_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43442069 - 43442205

Intron Length:

137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ATAATGCTAACC

Flanking Amino Acid:

GRAEDDSQDDDLELAVDEPE

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

80.4

33.7

Major BPS

0.72

78.4

31.2

Major PPT

80.4

0.68

0.7

73.6

31.4

Minor 5ss

34.1

-1.8

3.3

45.4

43.9

Minor BPS

44.7

-0.4

2.3

58.94

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016877

43415244 - 43446174

30931