Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_43490468_43492252_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43490468 - 43492252

Intron Length:

1785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGACA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCTGTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

GTCTTTATAACA

Flanking Amino Acid:

VVTHLHEAIKRLKQDMKSLR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.7

35.1

Major BPS

83.9

0.84

73.9

41.3

Major PPT

67.3

0.39

1.1

71.4

38.7

Minor 5ss

31.9

-2.1

3.1

40.7

45.3

Minor BPS

58.8

0.27

1.6

68.26

38.3

Associated Gene:

Gene:

KIF25

Ensembl Gene ID:

ENSAPLG00000016274

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016980

43458119 - 43498876

40758