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Intron Name: Anas_platyrhynchos_platyrhynchos_3_43509663_43511548_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43509663 - 43511548

Intron Length:

1886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTATGGTC

5'SS Class:

major

3'SS Sequence:

TCTGGACTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTTAC

U12 Branch Point Sequence:

TCCCTCTGGACT

Flanking Amino Acid:

ERTRREAEEKRRQEEEYYNR

Intron Amino Acid Position:

1601

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.43

1.2

65.3

38.9

Major BPS

63.8

0.34

1.2

57.4

41.4

Major PPT

0.54

66.1

39.9

Minor 5ss

30.2

-2.3

3.5

41.9

44.9

Minor BPS

54.2

0.21

1.5

68.72

42.4

Associated Gene:

Gene:

AFDN

Ensembl Gene ID:

ENSAPLG00000002298

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017037

43504174 - 43595836

91663

ENSAPLT00000017035

43504174 - 43595836

91663

ENSAPLT00000017034

43504174 - 43595836

91663

ENSAPLT00000002401

43509374 - 43595857

86484

ENSAPLT00000022178

43504174 - 43595836

91663