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Intron Name: Anas_platyrhynchos_platyrhynchos_3_43544445_43546442_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43544445 - 43546442

Intron Length:

1998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTTTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TCATCTTTAATA

Flanking Amino Acid:

SHLSHENAELAQPLRKEPEI

Intron Amino Acid Position:

948

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

74.2

0.54

0.9

71.7

32.9

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

75.9

0.81

1.1

75.68

36.2

Associated Gene:

Gene:

AFDN

Ensembl Gene ID:

ENSAPLG00000002298

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017035

43504174 - 43595836

91663

ENSAPLT00000017034

43504174 - 43595836

91663

ENSAPLT00000002401

43509374 - 43595857

86484

ENSAPLT00000022178

43504174 - 43595836

91663

ENSAPLT00000017037

43504174 - 43595836

91663