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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4356602_4356867_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4356602 - 4356867

Intron Length:

266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACGCGC

5'SS Class:

major

3'SS Sequence:

GTTTCCCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAG

U12 Branch Point Sequence:

TGGTCGCTAATC

Flanking Amino Acid:

SLGPKGMDKMIQDAKGDVTI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.2

51.4

45.5

Major BPS

56.5

0.16

1.6

40.9

Major PPT

81.9

0.72

0.8

78.3

30.6

Minor 5ss

36.8

-1.5

3.3

47.8

43.2

Minor BPS

-0.1

2.3

63.65

42.1

Associated Gene:

Gene:

CCT4

Ensembl Gene ID:

ENSAPLG00000003237

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003347

4356315 - 4362463

6149