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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4356958_4357689_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4356958 - 4357689

Intron Length:

732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCGGT

5'SS Class:

strong_major

3'SS Sequence:

ATTCACCATTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

TTGTTATTCACC

Flanking Amino Acid:

MQVLHPAAKMLVELSKAQDI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

68.8

42.2

Major BPS

82.3

0.8

83.6

25.8

Major PPT

67.4

0.39

0.9

64.1

37.3

Minor 5ss

38.2

-1.3

3.4

52.7

46.4

Minor BPS

54.1

0.11

70.79

40.7

Associated Gene:

Gene:

CCT4

Ensembl Gene ID:

ENSAPLG00000003237

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003347

4356315 - 4362463

6149