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Intron Name: Anas_platyrhynchos_platyrhynchos_3_43576296_43583968_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43576296 - 43583968

Intron Length:

7673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGCTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TATTTGTTATTT

Flanking Amino Acid:

KLPYLVELSPDGSDSRDKPK

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

80.7

0.69

0.9

73.5

36.5

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

51.5

0.13

2.2

76.26

Associated Gene:

Gene:

AFDN

Ensembl Gene ID:

ENSAPLG00000002298

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002401

43509374 - 43595857

86484

ENSAPLT00000022178

43504174 - 43595836

91663

ENSAPLT00000017037

43504174 - 43595836

91663

ENSAPLT00000017034

43504174 - 43595836

91663