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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4357799_4358484_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4357799 - 4358484

Intron Length:

686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGTG

5'SS Class:

strong_major

3'SS Sequence:

ATACAATTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TTTTATACAATT

Flanking Amino Acid:

LDACSRLLQKGIHPTIISES

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

72.2

39.5

Major BPS

0.72

78.4

31.2

Major PPT

66.2

0.36

58.1

41.2

Minor 5ss

34.5

-1.8

3.4

45.9

49.3

Minor BPS

50.5

0.09

1.9

78.26

38.1

Associated Gene:

Gene:

CCT4

Ensembl Gene ID:

ENSAPLG00000003237

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003347

4356315 - 4362463

6149