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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4358628_4359416_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4358628 - 4359416

Intron Length:

789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TTAAACCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TGTTGTTAAACC

Flanking Amino Acid:

NSATTSLNSKVVCQYSSLLS

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.1

45.1

Major BPS

83.9

0.84

73.9

41.3

Major PPT

63.5

0.3

0.9

59.8

37.4

Minor 5ss

40.5

-1.1

3.3

55.3

48.9

Minor BPS

54.5

0.12

2.1

70.5

41.3

Associated Gene:

Gene:

CCT4

Ensembl Gene ID:

ENSAPLG00000003237

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003347

4356315 - 4362463

6149