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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4365367_4365404_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4365367 - 4365404

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGTTACAG

5'SS Class:

weak_major

3'SS Sequence:

CTCTTACCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

TACCTCTTACCT

Flanking Amino Acid:

PVARKDAASNGFSSALPTWE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.4

0.15

1.1

44.1

39.1

Major BPS

69.2

0.48

37.1

Major PPT

68.4

0.42

68.5

31.1

Minor 5ss

31.6

-2.1

2.9

30.2

42.9

Minor BPS

0.39

1.6

74.02

42.7

Associated Gene:

Gene:

FAM161A

Ensembl Gene ID:

ENSAPLG00000003944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004034

4365200 - 4369522

4323