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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4365376_4365684_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4365376 - 4365684

Intron Length:

309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAACAG

U12 Branch Point Sequence:

CCCTTTTTTAAG

Flanking Amino Acid:

RKDAASNGCYRPTWEKSSYQ

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

42.3

-0.4

1.4

47.1

36.1

Major PPT

0.61

81.8

27.4

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

44.5

-0.5

1.8

42.73

Associated Gene:

Gene:

FAM161A

Ensembl Gene ID:

ENSAPLG00000003944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041565

4364239 - 4369585

5347

ENSAPLT00000034577

4364239 - 4371749

7511

ENSAPLT00000046661

4364239 - 4371749

7511