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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4367442_4369395_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4367442 - 4369395

Intron Length:

1954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTGT

5'SS Class:

major

3'SS Sequence:

GTATTTCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TAGACAATAATC

Flanking Amino Acid:

QMSKSKLETFRNYEKQRMQE

Intron Amino Acid Position:

558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

73.3

38.2

Major BPS

80.4

0.76

80.3

31.8

Major PPT

72.4

0.5

0.8

70.7

35.9

Minor 5ss

48.1

-0.2

2.5

67.9

42.9

Minor BPS

47.6

-0.2

1.9

58.9

39.6

Associated Gene:

Gene:

FAM161A

Ensembl Gene ID:

ENSAPLG00000003944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034577

4364239 - 4371749

7511