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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4370629_4371534_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4370629 - 4371534

Intron Length:

906

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTCTTGATG

5'SS Class:

weak_major

3'SS Sequence:

GAAGAGGAGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

CTGACCAACACT

Flanking Amino Acid:

LLGCSNAEDFGEAKAGLPRD

Intron Amino Acid Position:

635

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.1

1.3

51.6

44.6

Major BPS

69.1

0.47

60.7

37.6

Major PPT

40.2

-0.5

1.1

22.9

35.6

Minor 5ss

37.6

-1.4

3.1

45.6

44.5

Minor BPS

42.3

-0.5

2.3

61.11

48.2

Associated Gene:

Gene:

FAM161A

Ensembl Gene ID:

ENSAPLG00000003944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046661

4364239 - 4371749

7511

ENSAPLT00000034577

4364239 - 4371749

7511