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Intron Name: Anas_platyrhynchos_platyrhynchos_3_43827416_43828924_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43827416 - 43828924

Intron Length:

1509

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTAAATTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTCTAAATT

Flanking Amino Acid:

FTGRKLLFALATVANTACII

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

26.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.38

1.1

61.4

43.4

Minor 5ss

41.1

-1

2.5

50.4

46.1

Minor BPS

68.6

0.66

1.6

82.74

39.5

Associated Gene:

Gene:

UNC93A

Ensembl Gene ID:

ENSAPLG00000002434

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002449

43813641 - 43834187

20547