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Intron Name: Anas_platyrhynchos_platyrhynchos_3_43898918_43902409_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

43898918 - 43902409

Intron Length:

3492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TATTTCTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TATTTCTTGACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

82.3

32.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

79.9

0.67

76.6

37.2

Minor 5ss

40.5

-1.1

2.8

44.2

Minor BPS

79.9

0.93

82.96

30.8

Associated Gene:

Gene:

CCR6

Ensembl Gene ID:

ENSAPLG00000010486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030163

43893785 - 43902647

8863