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Intron Name: Anas_platyrhynchos_platyrhynchos_3_43923985_43924711_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

43923985 - 43924711

Intron Length:

727

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAG|GCAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

AAAAATTCTATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TACCCTTTAAAA

Flanking Amino Acid:

VNAKLGSLELGNGDDDEYAD

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.7

1.15

0.7

85.2

31.4

Major BPS

73.1

0.58

79.6

29.1

Major PPT

59.8

0.22

51.4

42.5

Minor 5ss

24.8

-2.9

3.6

33.7

41.6

Minor BPS

63.2

0.41

1.4

67.35

38.7

Associated Gene:

Gene:

FGFR1OP

Ensembl Gene ID:

ENSAPLG00000010607

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011048

43922419 - 43940822

18404