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Intron Name: Anas_platyrhynchos_platyrhynchos_3_44320217_44322418_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44320217 - 44322418

Intron Length:

2202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGACTT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCCCATTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TGTGATTTACCA

Flanking Amino Acid:

YTLGNISALASTCFLMGPLK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

67.8

0.4

0.8

67.1

27.9

Minor 5ss

-0.7

3.1

65.1

46.1

Minor BPS

49.5

-0

1.9

64.6

Associated Gene:

Gene:

SFT2D1

Ensembl Gene ID:

ENSAPLG00000012881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013403

44313294 - 44327731

14438