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Intron Name: Anas_platyrhynchos_platyrhynchos_3_44419022_44419121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44419022 - 44419121

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGCC

5'SS Class:

major

3'SS Sequence:

TGTCGCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCCAC

U12 Branch Point Sequence:

CCGCCCGCAGCG

Flanking Amino Acid:

TNEMIVTKNGRRMFPVLKVS

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

69.7

36.5

Major BPS

43.9

-0.3

1.4

49.9

45.3

Major PPT

69.6

0.44

0.9

62.3

34.7

Minor 5ss

29.4

-2.4

3.6

41.9

45.1

Minor BPS

36.9

-1.1

2.2

36.53

45.3

Associated Gene:

Gene:

TBXT

Ensembl Gene ID:

ENSAPLG00000018385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042664

44418522 - 44426355

7834