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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4468309_4476450_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4468309 - 4476450

Intron Length:

8142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGAGA

5'SS Class:

strong_major

3'SS Sequence:

AATTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

AAATCCTCAATT

Flanking Amino Acid:

WKILPRNQCEGIKKYVVGLI

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.6

42.7

Major BPS

65.7

0.39

71.3

30.3

Major PPT

80.4

0.68

0.8

74.3

35.5

Minor 5ss

30.2

-2.3

3.3

39.5

46.1

Minor BPS

67.1

0.62

1.5

77.37

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025028

4460535 - 4477859

17325