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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4476905_4477365_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4476905 - 4477365

Intron Length:

461

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TAATTTTTGACT

Flanking Amino Acid:

TQVKAKHLKDSMCNEFSQIF

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.3

1.16

0.7

93.2

21.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

89.2

0.88

0.7

84.2

30.9

Minor 5ss

-2.4

3.8

41.8

44.8

Minor BPS

70.6

0.73

1.1

79.96

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025028

4460535 - 4477859

17325