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Intron Name: Anas_platyrhynchos_platyrhynchos_3_44866647_44870056_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44866647 - 44870056

Intron Length:

3410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CATATATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTTTGTTTATAT

Flanking Amino Acid:

GKLRITQENQRKIWELIEKV

Intron Amino Acid Position:

463

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.8

38.7

Major BPS

79.2

0.73

75.3

39.4

Major PPT

73.7

0.53

0.9

70.4

39.8

Minor 5ss

32.4

-2

40.4

45.7

Minor BPS

55.1

0.24

2.1

80.79

41.2

Associated Gene:

Gene:

C6orf118

Ensembl Gene ID:

ENSAPLG00000010023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010435

44838809 - 44871455

32647