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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4493590_4494274_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4493590 - 4494274

Intron Length:

685

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTTAA

5'SS Class:

strong_major

3'SS Sequence:

GTGAATTATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTCATGTGAATT

Flanking Amino Acid:

HLRDFLVQIKEFAGEDTSDL

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

80.4

30.1

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

65.6

0.35

1.1

57.9

46.3

Minor 5ss

38.4

-1.3

49.1

47.1

Minor BPS

47.3

-0.1

2.1

68.71

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004184

4485979 - 4494421

8443