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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_45377993_45390756_R

Intron Information:

Intron Rank:
148093
Intron Class:
major
Intron Phase:
Intron Coordinates:
45377993 - 45390756
Intron Length:
12764

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ACA|GTGAGTTGT
5'SS Class:
major
3'SS Sequence:
TCTGTCTCCACAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
AATACAA
U12 Branch Point Sequence:
TCTGTCTCCACA
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
72.7
0.54
1
68.9
38.5
Major BPS
57
0.17
0.9
65
30.8
Major PPT
78.2
0.64
0.8
72.3
32.5
Minor 5ss
38.7
-1.3
3
54.8
43.5
Minor BPS
47.6
-0.1
2.1
62.43
44.3

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000026970
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000030222
45377334 - 45403997
26664