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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4563848_4564683_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4563848 - 4564683

Intron Length:

836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TGAATTGAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GCTTTCTGAATT

Flanking Amino Acid:

GSSYDTHWITMWAEKELNMM

Intron Amino Acid Position:

946

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

56.8

0.15

1.1

51.3

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

66.2

0.59

1.4

77.06

39.7

Associated Gene:

Gene:

USP34

Ensembl Gene ID:

ENSAPLG00000004912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042626

4559498 - 4629372

69875

ENSAPLT00000038677

4519615 - 4629372

109758

ENSAPLT00000005162

4519615 - 4629372

109758