Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_4570523_4573598_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4570523 - 4573598

Intron Length:

3076

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAATTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATT

Flanking Amino Acid:

GQSSRKGDFPGGLMGPVRMI

Intron Amino Acid Position:

1274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

76.7

34.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.5

0.75

0.8

79.2

32.9

Minor 5ss

45.7

-0.5

2.9

61.3

44.6

Minor BPS

80.4

1.03

0.9

89.47

28.1

Associated Gene:

Gene:

USP34

Ensembl Gene ID:

ENSAPLG00000004912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042626

4559498 - 4629372

69875

ENSAPLT00000038677

4519615 - 4629372

109758

ENSAPLT00000005162

4519615 - 4629372

109758