Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_4576216_4576351_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4576216 - 4576351

Intron Length:

136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAATAGGA

5'SS Class:

major

3'SS Sequence:

TGTTTGTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

TTTTTTGTGACT

Flanking Amino Acid:

PNRRIRRESTGSYSDLYPDS

Intron Amino Acid Position:

1461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

59.3

39.9

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

79.9

0.67

0.8

77.9

36.6

Minor 5ss

30.3

-2.2

3.3

39.2

46.1

Minor BPS

61.8

0.45

85.97

34.5

Associated Gene:

Gene:

USP34

Ensembl Gene ID:

ENSAPLG00000004912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042626

4559498 - 4629372

69875

ENSAPLT00000038677

4519615 - 4629372

109758

ENSAPLT00000005162

4519615 - 4629372

109758