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Intron Name: Anas_platyrhynchos_platyrhynchos_3_45984561_46033180_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45984561 - 46033180

Intron Length:

48620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTACGTGCG

5'SS Class:

major

3'SS Sequence:

ATTTTTGTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATT

Flanking Amino Acid:

TVKALMKNSVVRGPPLAGAF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

62.6

42.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.5

0.57

1.1

79.7

37.4

Minor 5ss

32.1

-2

3.3

38.1

Minor BPS

74.3

0.84

1.2

86.64

33.8

Associated Gene:

Gene:

PACRG

Ensembl Gene ID:

ENSAPLG00000010267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010685

45816808 - 46033918

217111