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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4603758_4604489_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4603758 - 4604489

Intron Length:

732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTCTAT

5'SS Class:

weak_major

3'SS Sequence:

TTTCTTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

TTTTCTGTATTT

Flanking Amino Acid:

LETFIHSKEKPTMLQWIELL

Intron Amino Acid Position:

2297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

69.5

37.4

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

95.3

1.02

0.5

91.2

20.6

Minor 5ss

55.9

0.2

2.4

73.2

43.6

Minor BPS

56.4

0.28

2.2

83.14

Associated Gene:

Gene:

USP34

Ensembl Gene ID:

ENSAPLG00000004912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005162

4519615 - 4629372

109758

ENSAPLT00000042626

4559498 - 4629372

69875

ENSAPLT00000038677

4519615 - 4629372

109758