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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4621821_4622912_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4621821 - 4622912

Intron Length:

1092

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CAATTTGTAATA

Flanking Amino Acid:

SPPELRNACIDVLKELVLLS

Intron Amino Acid Position:

3026

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

34.9

Major BPS

84.4

0.85

1.1

34.5

Major PPT

88.5

0.87

0.7

84.9

29.9

Minor 5ss

42.1

-0.9

2.9

55.5

43.9

Minor BPS

47.7

-0.1

1.9

56.04

37.8

Associated Gene:

Gene:

USP34

Ensembl Gene ID:

ENSAPLG00000004912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042626

4559498 - 4629372

69875

ENSAPLT00000038677

4519615 - 4629372

109758

ENSAPLT00000005162

4519615 - 4629372

109758