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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4627368_4627492_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4627368 - 4627492

Intron Length:

125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGGT

5'SS Class:

strong_major

3'SS Sequence:

ACTCTTTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TGTGGTTTAAAA

Flanking Amino Acid:

YTFLTHFLLKVQGQVFSEAN

Intron Amino Acid Position:

3218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

76.2

39.9

Major BPS

73.1

0.58

79.6

29.1

Major PPT

77.4

0.62

0.9

72.7

36.9

Minor 5ss

-1.9

3.5

49.2

47.1

Minor BPS

50.4

0.01

64.9

41.7

Associated Gene:

Gene:

USP34

Ensembl Gene ID:

ENSAPLG00000004912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042626

4559498 - 4629372

69875

ENSAPLT00000038677

4519615 - 4629372

109758

ENSAPLT00000005162

4519615 - 4629372

109758