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Intron Name: Anas_platyrhynchos_platyrhynchos_3_46862797_46870707_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46862797 - 46870707

Intron Length:

7911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCGTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCTGTCTTACTT

Flanking Amino Acid:

NFCERFGVLGSSKVLAKKEL

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

83.9

30.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

82.3

0.73

0.8

76.5

32.1

Minor 5ss

40.2

-1.1

49.9

46.4

Minor BPS

58.6

0.35

1.7

74.4

43.5

Associated Gene:

Gene:

AGPAT4

Ensembl Gene ID:

ENSAPLG00000012386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012923

46835960 - 46893164

57205