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Intron Name: Anas_platyrhynchos_platyrhynchos_3_46873098_46878590_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46873098 - 46878590

Intron Length:

5493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATTAC

U12 Branch Point Sequence:

AGTCACATAACC

Flanking Amino Acid:

AVTVQCLRNVVSAVYDSTLN

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

62.5

0.31

1.1

55.4

Major PPT

82.3

0.73

0.8

77.5

31.3

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

52.2

0.05

1.8

65.96

38.3

Associated Gene:

Gene:

AGPAT4

Ensembl Gene ID:

ENSAPLG00000012386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012923

46835960 - 46893164

57205