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Intron Name: Anas_platyrhynchos_platyrhynchos_3_46898104_46898661_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46898104 - 46898661

Intron Length:

558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTTTCAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

GCTGTATGAACT

Flanking Amino Acid:

GEVNSTLGTAAYMAPEVITR

Intron Amino Acid Position:

1463

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

74.7

Major BPS

77.9

0.69

0.8

75.9

Major PPT

69.9

0.45

1.1

70.4

39.2

Minor 5ss

26.2

-2.7

2.9

29.6

43.4

Minor BPS

48.5

-0

1.8

66.3

44.1

Associated Gene:

Gene:

MAP3K4

Ensembl Gene ID:

ENSAPLG00000011460

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012041

46896819 - 46971430

74612

ENSAPLT00000036713

46896273 - 46992419

96147

ENSAPLT00000035338

46896273 - 46992419

96147

ENSAPLT00000026988

46896273 - 46976277

80005

ENSAPLT00000022054

46896273 - 46976277

80005

ENSAPLT00000039938

46896819 - 46976277

79459