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Intron Name: Anas_platyrhynchos_platyrhynchos_3_46906355_46908530_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46906355 - 46908530

Intron Length:

2176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

AATTTTCTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

AAATAATGAAAA

Flanking Amino Acid:

DTGELMAMKEIRFQPNDHKT

Intron Amino Acid Position:

1330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

84.1

26.4

Major BPS

71.2

0.53

70.3

31.9

Major PPT

79.8

0.67

0.8

74.7

35.2

Minor 5ss

34.9

-1.7

3.4

49.4

41.3

Minor BPS

44.1

-0.4

1.9

53.47

36.9

Associated Gene:

Gene:

MAP3K4

Ensembl Gene ID:

ENSAPLG00000011460

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026988

46896273 - 46976277

80005

ENSAPLT00000022054

46896273 - 46976277

80005

ENSAPLT00000039938

46896819 - 46976277

79459

ENSAPLT00000012041

46896819 - 46971430

74612

ENSAPLT00000036713

46896273 - 46992419

96147

ENSAPLT00000035338

46896273 - 46992419

96147