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Intron Name: Anas_platyrhynchos_platyrhynchos_3_46930184_46932337_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46930184 - 46932337

Intron Length:

2154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCGTATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

TCTGTCTAAATT

Flanking Amino Acid:

FEEDLHKMLMVYFDYMRSWI

Intron Amino Acid Position:

671

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

74.9

36.2

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

78.7

0.65

0.9

73.5

Minor 5ss

48.6

-0.1

2.8

64.8

41.1

Minor BPS

0.33

1.8

74.4

43.5

Associated Gene:

Gene:

MAP3K4

Ensembl Gene ID:

ENSAPLG00000011460

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026988

46896273 - 46976277

80005

ENSAPLT00000022054

46896273 - 46976277

80005

ENSAPLT00000039938

46896819 - 46976277

79459

ENSAPLT00000012041

46896819 - 46971430

74612

ENSAPLT00000036713

46896273 - 46992419

96147

ENSAPLT00000035338

46896273 - 46992419

96147