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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4695129_4696488_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4695129 - 4696488

Intron Length:

1360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGTATATT

5'SS Class:

weak_major

3'SS Sequence:

CTTTTCTAATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TCTTTTCTAATC

Flanking Amino Acid:

EVCRKPGITIVVSMQQNKWD

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.5

0.15

1.1

65.9

39.3

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

78.2

0.63

0.9

78.7

33.5

Minor 5ss

43.7

-0.7

2.9

59.6

45.1

Minor BPS

59.8

0.29

1.6

69.85

36.3

Associated Gene:

Gene:

KIAA1841

Ensembl Gene ID:

ENSAPLG00000005956

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006183

4692544 - 4712233

19690

ENSAPLT00000006180

4688827 - 4712233

23407