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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4700665_4702671_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4700665 - 4702671

Intron Length:

2007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTGAAT

5'SS Class:

major

3'SS Sequence:

TCTGCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTGTGTACAACC

Flanking Amino Acid:

QHGNIVFVHIRDKTWEVHEY

Intron Amino Acid Position:

363

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

71.5

39.9

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

86.4

0.82

0.8

84.1

30.8

Minor 5ss

32.6

-2

3.5

47.9

47.8

Minor BPS

46.1

-0.3

2.2

63.22

42.5

Associated Gene:

Gene:

KIAA1841

Ensembl Gene ID:

ENSAPLG00000005956

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006183

4692544 - 4712233

19690

ENSAPLT00000006180

4688827 - 4712233

23407