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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47034780_47072265_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

47034780 - 47072265

Intron Length:

37486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTCTG

5'SS Class:

major

3'SS Sequence:

AACTCTGCAATAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

CTGTGTTTAACT

Flanking Amino Acid:

RWEYCNIPRCTTPPPEPAPG

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

62.8

43.3

Major BPS

74.5

0.61

79.6

29.1

Major PPT

57.1

0.16

51.5

37.2

Minor 5ss

34.6

-1.8

3.1

46.9

42.4

Minor BPS

65.1

0.55

1.8

79.01

43.8

Associated Gene:

Gene:

PLG

Ensembl Gene ID:

ENSAPLG00000010099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039779

47026220 - 47081756

55537

ENSAPLT00000030676

47026220 - 47084834

58615

ENSAPLT00000029792

47026220 - 47084834

58615