Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_47037455_47038327_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47037455 - 47038327

Intron Length:

873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGAGTA

5'SS Class:

major

3'SS Sequence:

CTGTTTGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATGAT

U12 Branch Point Sequence:

ATGCAAGGGACC

Flanking Amino Acid:

RCDRTEQGSADVPAQIPQVE

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

69.6

34.6

Major BPS

59.7

0.24

1.2

51.3

42.7

Major PPT

78.4

0.64

0.9

37.4

Minor 5ss

40.2

-1.1

3.4

52.3

46.8

Minor BPS

34.8

-1.2

2.2

44.58

36.7

Associated Gene:

Gene:

PLG

Ensembl Gene ID:

ENSAPLG00000010099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042534

47026220 - 47084834

58615