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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4706009_4707034_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4706009 - 4707034

Intron Length:

1026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCCTTTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TGGTCCTAATTT

Flanking Amino Acid:

NSGENTDESQGPNMVIHVCD

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.7

40.1

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

62.1

0.27

1.7

73.4

37.1

Minor 5ss

32.4

-2

2.9

32.3

Minor BPS

53.6

0.19

72.26

45.1

Associated Gene:

Gene:

KIAA1841

Ensembl Gene ID:

ENSAPLG00000005956

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006183

4692544 - 4712233

19690

ENSAPLT00000006180

4688827 - 4712233

23407