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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47069582_47070414_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47069582 - 47070414

Intron Length:

833

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTATGGCCT

5'SS Class:

major

3'SS Sequence:

AATTCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTCTCTAATC

Flanking Amino Acid:

KWADSIPHKPNYTPEKYPNA

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

62.4

41.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.4

0.77

0.8

81.5

35.1

Minor 5ss

41.2

-1

3.3

57.3

41.3

Minor BPS

66.8

0.51

1.6

76.22

33.7

Associated Gene:

Gene:

PLG

Ensembl Gene ID:

ENSAPLG00000010099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022386

47026220 - 47084843

58624

ENSAPLT00000010620

47058510 - 47084834

26325