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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47070555_47071140_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47070555 - 47071140

Intron Length:

586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGGATA

5'SS Class:

major

3'SS Sequence:

CTTGTTCCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTGTCTTCATTC

Flanking Amino Acid:

FDYCNIPECEVECMHCSGEN

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.3

78.7

37.2

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

82.9

0.74

0.8

76.6

32.2

Minor 5ss

31.3

-2.1

3.1

45.6

Minor BPS

52.9

0.07

1.8

66.03

40.5

Associated Gene:

Gene:

PLG

Ensembl Gene ID:

ENSAPLG00000010099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022386

47026220 - 47084843

58624

ENSAPLT00000010620

47058510 - 47084834

26325